The 2.0 version of rSNPBase

Variant report

Variant rs11738768
Chromosome Location chr5:95237780-95237781
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:95213000-95244600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:95214400-95247800 Weak transcription Rectal Smooth Muscle rectum
3 chr5:95214400-95251800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:95215800-95244600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:95218000-95242200 Weak transcription Spleen Spleen
6 chr5:95218200-95246200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr5:95219800-95244400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr5:95220000-95242000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr5:95220000-95245200 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr5:95220600-95243200 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr5:95220800-95240800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr5:95221600-95252200 Weak transcription Primary T cells fromperipheralblood blood
13 chr5:95222000-95241600 Strong transcription GM12878-XiMat blood
14 chr5:95222000-95252200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr5:95223000-95259800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr5:95226400-95263600 Weak transcription Colonic Mucosa Colon
17 chr5:95227400-95251600 Weak transcription Primary T cells from cord blood blood
18 chr5:95227400-95253800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr5:95227600-95242400 Weak transcription Placenta Amnion Placenta Amnion
20 chr5:95227600-95244600 Weak transcription Small Intestine intestine
21 chr5:95230800-95237800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr5:95231200-95254000 Weak transcription Fetal Stomach stomach
23 chr5:95231800-95239600 Weak transcription Left Ventricle heart
24 chr5:95231800-95242200 Weak transcription Pancreas Pancrea
25 chr5:95231800-95242400 Weak transcription Right Ventricle heart
26 chr5:95231800-95243200 Weak transcription Lung lung
27 chr5:95231800-95244200 Weak transcription Ovary ovary
28 chr5:95232000-95238400 Enhancers Pancreatic Islets Pancreatic Islet
29 chr5:95232200-95244600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr5:95232400-95255200 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr5:95232600-95244600 Weak transcription H1 Cell Line embryonic stem cell
32 chr5:95232600-95247400 Weak transcription Aorta Aorta
33 chr5:95232800-95240600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr5:95232800-95242000 Weak transcription Duodenum Mucosa Duodenum
35 chr5:95232800-95242200 Weak transcription Gastric stomach
36 chr5:95232800-95243000 Weak transcription Esophagus oesophagus
37 chr5:95232800-95244200 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr5:95232800-95244600 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr5:95234200-95251800 Weak transcription Primary B cells from peripheral blood blood
40 chr5:95234400-95244800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr5:95234400-95251800 Weak transcription Fetal Thymus thymus
42 chr5:95234600-95244600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr5:95235000-95237800 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr5:95235000-95238000 Strong transcription HepG2 liver
45 chr5:95235000-95239800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr5:95235000-95242400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr5:95235000-95251800 Weak transcription Primary B cells from cord blood blood
48 chr5:95235400-95238000 Enhancers Brain Anterior Caudate brain
49 chr5:95235400-95240000 Genic enhancers Muscle Satellite Cultured Cells --
50 chr5:95235600-95238000 Enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015