Variant report

Variant rs3777190
Chromosome Location chr5:95247972-95247973
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:95214400-95251800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr5:95221600-95252200 Weak transcription Primary T cells fromperipheralblood blood
3 chr5:95222000-95252200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr5:95223000-95259800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr5:95226400-95263600 Weak transcription Colonic Mucosa Colon
6 chr5:95227400-95251600 Weak transcription Primary T cells from cord blood blood
7 chr5:95227400-95253800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr5:95231200-95254000 Weak transcription Fetal Stomach stomach
9 chr5:95232400-95255200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr5:95234200-95251800 Weak transcription Primary B cells from peripheral blood blood
11 chr5:95234400-95251800 Weak transcription Fetal Thymus thymus
12 chr5:95235000-95251800 Weak transcription Primary B cells from cord blood blood
13 chr5:95236000-95251600 Weak transcription Primary hematopoietic stem cells blood
14 chr5:95236200-95254200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:95236400-95249600 Weak transcription Fetal Lung lung
16 chr5:95236400-95276600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr5:95236800-95260000 Weak transcription Stomach Smooth Muscle stomach
18 chr5:95237800-95251800 Weak transcription K562 blood
19 chr5:95238200-95260400 Weak transcription A549 lung
20 chr5:95238200-95282000 Weak transcription HUVEC blood vessel
21 chr5:95239400-95252000 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr5:95239600-95249600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr5:95239600-95253200 Strong transcription Osteobl bone
24 chr5:95240000-95250600 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr5:95241000-95252000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr5:95241200-95248200 Genic enhancers Muscle Satellite Cultured Cells --
27 chr5:95241600-95249200 Genic enhancers Liver Liver
28 chr5:95242400-95248000 Strong transcription NHLF lung
29 chr5:95242400-95248600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr5:95242600-95248600 Strong transcription Placenta Placenta
31 chr5:95242600-95251000 Weak transcription Primary monocytes fromperipheralblood blood
32 chr5:95242600-95251800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr5:95242600-95251800 Weak transcription Spleen Spleen
34 chr5:95242600-95259000 Weak transcription Duodenum Mucosa Duodenum
35 chr5:95242600-95259800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr5:95242800-95249000 Enhancers Brain Cingulate Gyrus brain
37 chr5:95243000-95255600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:95243000-95256800 Enhancers Brain Substantia Nigra brain
39 chr5:95243400-95251200 Weak transcription Esophagus oesophagus
40 chr5:95243400-95278800 Weak transcription Lung lung
41 chr5:95243600-95274200 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr5:95244400-95258600 Weak transcription Fetal Intestine Large intestine
43 chr5:95244800-95251400 Weak transcription Stomach Mucosa stomach
44 chr5:95244800-95260600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr5:95245000-95249400 Weak transcription Pancreas Pancrea
46 chr5:95245000-95249600 Strong transcription HMEC breast
47 chr5:95245000-95251200 Weak transcription HSMMtube muscle
48 chr5:95245000-95254600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr5:95245000-95256400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr5:95245200-95249200 Weak transcription Pancreatic Islets Pancreatic Islet

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