Variant report

Variant rs2548594
Chromosome Location chr5:95244414-95244415
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:95213000-95244600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:95214400-95247800 Weak transcription Rectal Smooth Muscle rectum
3 chr5:95214400-95251800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:95215800-95244600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:95218200-95246200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr5:95220000-95245200 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr5:95221600-95252200 Weak transcription Primary T cells fromperipheralblood blood
8 chr5:95222000-95252200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr5:95223000-95259800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr5:95226400-95263600 Weak transcription Colonic Mucosa Colon
11 chr5:95227400-95251600 Weak transcription Primary T cells from cord blood blood
12 chr5:95227400-95253800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr5:95227600-95244600 Weak transcription Small Intestine intestine
14 chr5:95231200-95254000 Weak transcription Fetal Stomach stomach
15 chr5:95232200-95244600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:95232400-95255200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr5:95232600-95244600 Weak transcription H1 Cell Line embryonic stem cell
18 chr5:95232600-95247400 Weak transcription Aorta Aorta
19 chr5:95232800-95244600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr5:95234200-95251800 Weak transcription Primary B cells from peripheral blood blood
21 chr5:95234400-95244800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:95234400-95251800 Weak transcription Fetal Thymus thymus
23 chr5:95234600-95244600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr5:95235000-95251800 Weak transcription Primary B cells from cord blood blood
25 chr5:95236000-95247600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr5:95236000-95251600 Weak transcription Primary hematopoietic stem cells blood
27 chr5:95236200-95254200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:95236400-95249600 Weak transcription Fetal Lung lung
29 chr5:95236400-95276600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr5:95236600-95244600 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr5:95236800-95244600 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr5:95236800-95260000 Weak transcription Stomach Smooth Muscle stomach
33 chr5:95237800-95251800 Weak transcription K562 blood
34 chr5:95238000-95244600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr5:95238000-95244600 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr5:95238000-95244600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:95238200-95244800 Weak transcription Fetal Kidney kidney
38 chr5:95238200-95260400 Weak transcription A549 lung
39 chr5:95238200-95282000 Weak transcription HUVEC blood vessel
40 chr5:95239400-95245800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr5:95239400-95246200 Weak transcription Fetal Intestine Small intestine
42 chr5:95239400-95252000 Strong transcription Primary T helper cells PMA-I stimulated --
43 chr5:95239600-95249600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:95239600-95253200 Strong transcription Osteobl bone
45 chr5:95239800-95247600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr5:95240000-95245000 Strong transcription NHEK skin
47 chr5:95240000-95250600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr5:95240600-95246400 Strong transcription NHDF-Ad bronchial
49 chr5:95241000-95246200 Weak transcription Left Ventricle heart
50 chr5:95241000-95252000 Weak transcription Sigmoid Colon Sigmoid Colon

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