Variant report

Variant	rs11749266
Chromosome Location	chr5:115872001-115872002
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11743446	0.89[EUR][1000 genomes]
rs1284596	1.00[AFR][1000 genomes]
rs17140061	0.85[EUR][1000 genomes]
rs17140067	0.85[EUR][1000 genomes]
rs60428629	0.94[EUR][1000 genomes]
rs6867701	0.94[EUR][1000 genomes]
rs73781648	0.94[EUR][1000 genomes]
rs7707177	0.85[EUR][1000 genomes]
rs7711559	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7726579	0.85[EUR][1000 genomes]
rs7730835	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:115858400-115873600	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr5:115860000-115872200	Enhancers	HepG2	liver
3	chr5:115864600-115872200	Weak transcription	Fetal Brain Male	brain
4	chr5:115866400-115873200	Enhancers	Fetal Muscle Leg	muscle
5	chr5:115867600-115873200	Enhancers	Colon Smooth Muscle	Colon
6	chr5:115868000-115872800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr5:115868000-115873200	Enhancers	Stomach Smooth Muscle	stomach
8	chr5:115868200-115873200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr5:115868400-115873000	Enhancers	Fetal Lung	lung
10	chr5:115868600-115876000	Weak transcription	Psoas Muscle	Psoas
11	chr5:115868800-115872200	Weak transcription	Fetal Brain Female	brain
12	chr5:115868800-115872200	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr5:115869000-115873400	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr5:115869200-115873200	Weak transcription	Fetal Heart	heart
15	chr5:115869600-115875200	Genic enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr5:115870200-115872200	Weak transcription	Rectal Smooth Muscle	rectum
17	chr5:115870200-115872400	Genic enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr5:115870200-115872600	Weak transcription	Fetal Kidney	kidney
19	chr5:115870200-115873000	Weak transcription	Gastric	stomach
20	chr5:115870400-115872200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr5:115870400-115873200	Enhancers	Duodenum Smooth Muscle	Duodenum
22	chr5:115870600-115873200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr5:115871000-115872200	Active TSS	Placenta	Placenta
24	chr5:115871000-115872200	Weak transcription	Left Ventricle	heart
25	chr5:115871000-115872200	Weak transcription	Lung	lung
26	chr5:115871000-115872400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr5:115871000-115872600	Enhancers	H9 Cell Line	embryonic stem cell
28	chr5:115871000-115872800	Weak transcription	Small Intestine	intestine
29	chr5:115871000-115890400	Weak transcription	Pancreas	Pancrea
30	chr5:115871200-115872600	Active TSS	Duodenum Mucosa	Duodenum
31	chr5:115871200-115873400	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr5:115871400-115872200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
33	chr5:115871400-115872200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
34	chr5:115871400-115872200	Weak transcription	Adipose Nuclei	Adipose
35	chr5:115871400-115872800	Genic enhancers	HUES6 Cell Line	embryonic stem cell
36	chr5:115871400-115882000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr5:115871600-115872200	Enhancers	Brain Germinal Matrix	brain
38	chr5:115871600-115873000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr5:115871800-115872400	Enhancers	Fetal Stomach	stomach
40	chr5:115871800-115872600	Active TSS	Brain Cingulate Gyrus	brain
41	chr5:115871800-115872800	Active TSS	Colonic Mucosa	Colon
42	chr5:115871800-115873000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr5:115871800-115873000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr5:115871800-115873000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
45	chr5:115871800-115873000	Enhancers	Right Atrium	heart
46	chr5:115871800-115873200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr5:115872000-115872200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr5:115872000-115872200	Enhancers	Fetal Intestine Large	intestine
49	chr5:115872000-115872200	Enhancers	Rectal Mucosa Donor 31	rectum
50	chr5:115872000-115872400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain

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