Variant report

Variant	rs11755388
Chromosome Location	chr6:143629331-143629332
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs11752486	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11752523	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11753012	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11753048	0.81[EUR][1000 genomes]
rs11754065	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11754096	0.81[EUR][1000 genomes]
rs11755477	0.81[EUR][1000 genomes]
rs11756753	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11757350	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12055598	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2117500	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4895606	0.80[EUR][1000 genomes]
rs4895607	0.81[EUR][1000 genomes]
rs4896632	0.81[EUR][1000 genomes]
rs4896633	0.81[EUR][1000 genomes]
rs4896634	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4896635	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4896636	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4896637	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4896639	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55833035	0.81[EUR][1000 genomes]
rs56777119	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56805320	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57732613	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59887794	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61394207	0.81[EUR][1000 genomes]
rs61517177	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs67976828	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6937858	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72996196	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9373386	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9376741	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9386030	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9390074	0.80[EUR][1000 genomes]
rs9390076	0.81[EUR][1000 genomes]
rs9390078	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9403478	0.80[EUR][1000 genomes]
rs9403483	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9496561	0.81[EUR][1000 genomes]
rs967633	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9800569	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143608800-143629400	Weak transcription	NHEK	skin
2	chr6:143615400-143643400	Weak transcription	HSMM	muscle
3	chr6:143618800-143634600	Weak transcription	Psoas Muscle	Psoas
4	chr6:143620600-143629600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:143622600-143629400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr6:143623200-143630200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:143623200-143644600	Weak transcription	Liver	Liver
8	chr6:143629000-143630000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
9	chr6:143629200-143630000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell

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