Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10945278	0.90[EUR][1000 genomes]
rs11757574	0.90[EUR][1000 genomes]
rs12524190	0.91[EUR][1000 genomes]
rs12529422	0.91[EUR][1000 genomes]
rs16869607	0.96[CEU][hapmap];1.00[CHB][hapmap]
rs2347632	0.90[EUR][1000 genomes]
rs2347633	0.90[EUR][1000 genomes]
rs4479893	0.89[EUR][1000 genomes]
rs4506005	0.90[EUR][1000 genomes]
rs55870610	0.91[EUR][1000 genomes]
rs56291137	0.89[EUR][1000 genomes]
rs6907179	0.96[CEU][hapmap];1.00[CHB][hapmap]
rs6911809	1.00[CHB][hapmap]
rs6927786	0.88[EUR][1000 genomes]
rs72920735	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7451863	0.90[EUR][1000 genomes]
rs7746949	0.90[EUR][1000 genomes]
rs7774025	0.95[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9283838	0.88[EUR][1000 genomes]
rs9294883	0.90[EUR][1000 genomes]
rs9354961	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv886148	chr6:71623253-71694742	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be: