Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10945278	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11757574	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11759339	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs12524190	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12529422	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16869607	0.88[CEU][hapmap];1.00[CHB][hapmap]
rs2347632	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2347633	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2347635	0.82[AMR][1000 genomes]
rs4479893	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4506005	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55870610	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56291137	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6907179	0.87[CEU][hapmap];1.00[CHB][hapmap]
rs6911809	1.00[CHB][hapmap]
rs6927786	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72920735	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7746949	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7774025	0.87[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9283838	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9294883	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9354961	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv966627	chr6:71699692-71726851	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

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Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71717000-71721800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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