Variant report

Variant	rs11763320
Chromosome Location	chr7:15630754-15630755
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10240218	0.81[EUR][1000 genomes]
rs10241878	0.82[EUR][1000 genomes]
rs10777	0.86[CEU][hapmap];0.82[TSI][hapmap]
rs10950569	0.82[EUR][1000 genomes]
rs1155150	0.81[EUR][1000 genomes]
rs11770155	0.82[EUR][1000 genomes]
rs11982464	0.81[EUR][1000 genomes]
rs11982492	0.81[EUR][1000 genomes]
rs12699738	0.86[AFR][1000 genomes]
rs1859269	0.89[ASN][1000 genomes]
rs1859271	0.89[ASN][1000 genomes]
rs2079191	0.89[ASN][1000 genomes]
rs2189446	0.88[AFR][1000 genomes]
rs2189447	0.89[ASN][1000 genomes]
rs2237492	1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs28835422	0.88[AFR][1000 genomes]
rs4721449	0.82[EUR][1000 genomes]
rs62438998	0.91[ASN][1000 genomes]
rs6461192	0.81[EUR][1000 genomes]
rs6461193	0.81[EUR][1000 genomes]
rs6461194	0.91[ASN][1000 genomes]
rs6461195	0.81[EUR][1000 genomes]
rs6942444	0.81[EUR][1000 genomes]
rs6946852	0.89[ASN][1000 genomes]
rs6964578	0.90[ASN][1000 genomes]
rs714657	0.81[EUR][1000 genomes]
rs714658	0.81[EUR][1000 genomes]
rs7776567	0.89[ASN][1000 genomes]
rs7788333	0.82[EUR][1000 genomes]
rs966469	0.81[EUR][1000 genomes]
rs966470	0.91[ASN][1000 genomes]
rs984954	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932168	chr7:15573437-15895294	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv523199	chr7:15582208-16042596	Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv606299	chr7:15603853-15637887	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv887735	chr7:15625992-15698178	Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases
5	nsv606300	chr7:15630754-15637713	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11763320	ANKMY2	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:15630200-15648800	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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