Variant report

Variant	rs11765705
Chromosome Location	chr7:39106942-39106943
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:39100776..39102763-chr7:39104623..39107259,2	K562	blood:
2	chr7:39106470..39108437-chr7:39109881..39112048,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10464366	0.91[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.95[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10464368	0.84[EUR][1000 genomes]
rs10951593	0.90[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.92[GIH][hapmap];0.95[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11973171	0.88[CHB][hapmap]
rs12667577	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12670003	0.88[CHB][hapmap]
rs12671046	0.88[CHB][hapmap];0.90[CHD][hapmap];0.85[MEX][hapmap]
rs12701691	0.81[AMR][1000 genomes]
rs13242209	0.84[EUR][1000 genomes]
rs1525798	0.91[CEU][hapmap];0.94[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.85[EUR][1000 genomes]
rs1527952	0.86[CEU][hapmap];0.94[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.84[EUR][1000 genomes]
rs17171519	0.87[CHB][hapmap]
rs2392618	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4723819	0.85[EUR][1000 genomes]
rs6462886	0.87[CHB][hapmap]
rs6944670	0.87[CHB][hapmap]
rs6945380	0.91[CEU][hapmap];0.94[CHB][hapmap];0.83[CHD][hapmap];0.83[GIH][hapmap];0.84[EUR][1000 genomes]
rs6952464	0.87[CHB][hapmap]
rs6957662	0.84[EUR][1000 genomes]
rs6974522	0.87[CHB][hapmap]
rs6979210	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7801660	0.87[CHB][hapmap]
rs885352	0.84[CEU][hapmap];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024142	chr7:38978728-39300444	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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