Variant report

Variant	rs11786763
Chromosome Location	chr8:96199142-96199143
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10093480	0.86[EUR][1000 genomes]
rs11773989	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11781098	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11784608	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17730693	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28671435	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017301	chr8:95273503-96248352	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv539680	chr8:95273503-96248352	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:96191600-96202200	Weak transcription	Aorta	Aorta
2	chr8:96194400-96203000	Weak transcription	Placenta	Placenta
3	chr8:96195000-96201800	Weak transcription	Fetal Thymus	thymus
4	chr8:96195000-96202800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr8:96196000-96202800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr8:96196800-96202600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr8:96197000-96199200	Weak transcription	Primary B cells from peripheral blood	blood
8	chr8:96197200-96199400	Weak transcription	Primary B cells from cord blood	blood
9	chr8:96198000-96205000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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