Variant report

Variant rs1180098
Chromosome Location chr9:72875210-72875211
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72871000-72876200 Active TSS Pancreatic Islets Pancreatic Islet
2 chr9:72872600-72875600 Active TSS Brain Cingulate Gyrus brain
3 chr9:72872800-72875400 Active TSS Brain Inferior Temporal Lobe brain
4 chr9:72872800-72876200 Active TSS ES-I3 Cell Line embryonic stem cell
5 chr9:72873000-72875400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
6 chr9:72873000-72875400 Active TSS Fetal Kidney kidney
7 chr9:72873000-72875400 Active TSS A549 lung
8 chr9:72873000-72876000 Active TSS Breast Myoepithelial Primary Cells Breast
9 chr9:72873400-72875400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr9:72873400-72875400 Active TSS HUES6 Cell Line embryonic stem cell
11 chr9:72873400-72875400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
12 chr9:72873400-72875400 Active TSS NHDF-Ad bronchial
13 chr9:72873400-72876000 Active TSS iPS-15b Cell Line embryonic stem cell
14 chr9:72873600-72875400 Active TSS HUES48 Cell Line embryonic stem cell
15 chr9:72873600-72875400 Active TSS GM12878-XiMat blood
16 chr9:72873600-72875400 Active TSS Hela-S3 cervix
17 chr9:72873600-72875400 Active TSS Osteobl bone
18 chr9:72873600-72875600 Active TSS Colonic Mucosa Colon
19 chr9:72873600-72876000 Active TSS iPS-20b Cell Line embryonic stem cell
20 chr9:72873600-72876000 Active TSS NHLF lung
21 chr9:72874000-72875800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
22 chr9:72874200-72875400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr9:72874400-72875400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr9:72874400-72875400 Flanking Active TSS Adipose Nuclei Adipose
25 chr9:72874400-72875400 Flanking Active TSS Thymus Thymus
26 chr9:72874400-72875600 Flanking Active TSS Primary T cells fromperipheralblood blood
27 chr9:72874400-72875800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
28 chr9:72874400-72875800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr9:72874600-72875400 Flanking Active TSS HUVEC blood vessel
30 chr9:72874600-72875600 Flanking Active TSS Brain Hippocampus Middle brain
31 chr9:72874600-72875800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
32 chr9:72874600-72876400 Enhancers Spleen Spleen
33 chr9:72874800-72875400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr9:72874800-72875400 Flanking Active TSS Placenta Placenta
35 chr9:72874800-72875400 Flanking Active TSS Lung lung
36 chr9:72874800-72875400 Flanking Active TSS Right Atrium heart
37 chr9:72874800-72875400 Flanking Active TSS Dnd41 blood
38 chr9:72874800-72875400 Active TSS HepG2 liver
39 chr9:72874800-72875600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
40 chr9:72874800-72875600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
41 chr9:72874800-72875600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
42 chr9:72874800-72875600 Transcr. at gene 5' and 3' Fetal Stomach stomach
43 chr9:72874800-72875600 Enhancers Sigmoid Colon Sigmoid Colon
44 chr9:72874800-72875800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
45 chr9:72874800-72875800 Enhancers Primary Natural Killer cells fromperipheralblood blood
46 chr9:72874800-72875800 Flanking Active TSS Brain Anterior Caudate brain
47 chr9:72874800-72875800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
48 chr9:72874800-72876000 Enhancers Primary monocytes fromperipheralblood blood
49 chr9:72874800-72876000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr9:72874800-72876000 Enhancers Fetal Brain Male brain

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