Variant report

Variant	rs11819595
Chromosome Location	chr10:119196991-119196992
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1983914	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55873277	1.00[AMR][1000 genomes]
rs55998432	1.00[AMR][1000 genomes]
rs58812633	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74162309	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74162310	0.91[AFR][1000 genomes]
rs74162311	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74162312	1.00[AMR][1000 genomes]
rs74162319	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv7565	chr10:119167461-119212529	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119186000-119202200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:119191600-119197000	Weak transcription	NHDF-Ad	bronchial
3	chr10:119192400-119197600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr10:119192800-119197600	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr10:119195800-119204600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:119196000-119199600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr10:119196200-119200000	Enhancers	HMEC	breast
8	chr10:119196600-119197200	Weak transcription	NHEK	skin
9	chr10:119196800-119197200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr10:119196800-119197200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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