Variant report

Variant	rs74162312
Chromosome Location	chr10:119203187-119203188
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:119202081..119203340-chr10:119237533..119238326,4	MCF-7	breast:
2	chr10:119202992..119204778-chr10:119219180..119221584,2	MCF-7	breast:
3	chr10:119196957..119199518-chr10:119202599..119205529,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11819595	1.00[AMR][1000 genomes]
rs1983914	1.00[AMR][1000 genomes]
rs55873277	1.00[AMR][1000 genomes]
rs55998432	1.00[AMR][1000 genomes]
rs58812633	1.00[AMR][1000 genomes]
rs74162309	1.00[AMR][1000 genomes]
rs74162311	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74162319	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv7565	chr10:119167461-119212529	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119195800-119204600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr10:119200800-119203200	Enhancers	Muscle Satellite Cultured Cells	--
3	chr10:119201000-119203200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr10:119201000-119203200	Enhancers	HMEC	breast
5	chr10:119201000-119203400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr10:119201000-119203400	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr10:119201000-119203400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr10:119201000-119203400	Enhancers	NHEK	skin
9	chr10:119201600-119203200	Enhancers	Brain Hippocampus Middle	brain
10	chr10:119201800-119203200	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr10:119201800-119203400	Enhancers	Esophagus	oesophagus
12	chr10:119202000-119203200	Enhancers	Osteobl	bone
13	chr10:119202200-119203200	Bivalent Enhancer	Fetal Muscle Leg	muscle
14	chr10:119202200-119203200	Enhancers	Pancreas	Pancrea
15	chr10:119202200-119203200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
16	chr10:119202400-119203200	Enhancers	Spleen	Spleen
17	chr10:119202400-119203200	Enhancers	Hela-S3	cervix
18	chr10:119202600-119203200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr10:119202600-119203200	Active TSS	Liver	Liver
20	chr10:119202600-119203200	Active TSS	Colonic Mucosa	Colon
21	chr10:119202600-119203200	Enhancers	Lung	lung
22	chr10:119202800-119203200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr10:119202800-119203200	Enhancers	HUVEC	blood vessel
24	chr10:119202800-119203200	Enhancers	NHDF-Ad	bronchial
25	chr10:119202800-119208000	Weak transcription	Ovary	ovary
26	chr10:119203000-119203200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr10:119203000-119203200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr10:119203000-119203200	Enhancers	Colon Smooth Muscle	Colon
29	chr10:119203000-119203200	Flanking Active TSS	Duodenum Mucosa	Duodenum
30	chr10:119203000-119203200	Enhancers	Fetal Intestine Large	intestine
31	chr10:119203000-119203200	Enhancers	Skeletal Muscle Male	skeletal muscle
32	chr10:119203000-119203200	Bivalent Enhancer	HSMM	muscle
33	chr10:119203000-119203400	Enhancers	Primary neutrophils fromperipheralblood	blood
34	chr10:119203000-119203400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr10:119203000-119203400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr10:119203000-119203400	Enhancers	Adipose Nuclei	Adipose
37	chr10:119203000-119203400	Enhancers	Fetal Intestine Small	intestine

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