Variant report

Variant	rs74162311
Chromosome Location	chr10:119198757-119198758
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:119196957..119199518-chr10:119202599..119205529,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11819595	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1983914	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55873277	1.00[AMR][1000 genomes]
rs55998432	1.00[AMR][1000 genomes]
rs58812633	1.00[AMR][1000 genomes]
rs74162309	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74162312	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74162319	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv7565	chr10:119167461-119212529	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119186000-119202200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:119195800-119204600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr10:119196000-119199600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr10:119196200-119200000	Enhancers	HMEC	breast
5	chr10:119197000-119200200	Enhancers	NHDF-Ad	bronchial
6	chr10:119197200-119199400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr10:119197200-119199400	Enhancers	NHEK	skin
8	chr10:119197200-119199600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr10:119197200-119199800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr10:119197600-119198800	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr10:119197600-119199600	Enhancers	Primary neutrophils fromperipheralblood	blood
12	chr10:119197800-119201200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr10:119198200-119198800	Enhancers	Primary B cells from cord blood	blood
14	chr10:119198200-119200800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr10:119198400-119199600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr10:119198400-119199800	Enhancers	Muscle Satellite Cultured Cells	--
17	chr10:119198600-119198800	Enhancers	Esophagus	oesophagus
18	chr10:119198600-119198800	Flanking Active TSS	Osteobl	bone
19	chr10:119198600-119199000	Enhancers	NH-A	brain
20	chr10:119198600-119199200	Enhancers	HSMMtube	muscle
21	chr10:119198600-119199600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr10:119198600-119199600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr10:119198600-119200000	Enhancers	Primary monocytes fromperipheralblood	blood

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