Variant report

Variant	rs11830209
Chromosome Location	chr12:26291625-26291626
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10161019	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11048415	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11829854	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1871553	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2046066	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2256828	0.93[ASN][1000 genomes]
rs2729629	0.82[ASN][1000 genomes]
rs35687239	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7304527	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74072014	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74072064	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74072070	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74072071	1.00[EUR][1000 genomes]
rs74072073	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7955074	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26288600-26306600	Weak transcription	Aorta	Aorta
2	chr12:26289800-26296000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr12:26290400-26292000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr12:26291600-26291800	Enhancers	Fetal Intestine Small	intestine
5	chr12:26291600-26292400	Enhancers	Rectal Mucosa Donor 29	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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