Variant report

Variant	rs2729629
Chromosome Location	chr12:26290691-26290692
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10734754	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11048415	0.82[ASN][1000 genomes]
rs11048419	0.83[EUR][1000 genomes]
rs11829854	0.82[ASN][1000 genomes]
rs11830209	0.82[ASN][1000 genomes]
rs1480032	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1871553	0.81[AMR][1000 genomes]
rs1993972	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1993973	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2046066	0.81[AMR][1000 genomes]
rs2256828	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2343074	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2343075	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35687239	0.82[ASN][1000 genomes]
rs56686254	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7309947	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7955074	0.82[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26288600-26306600	Weak transcription	Aorta	Aorta
2	chr12:26289600-26291600	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr12:26289800-26296000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr12:26290400-26291600	Weak transcription	Fetal Intestine Small	intestine
5	chr12:26290400-26292000	Weak transcription	Rectal Mucosa Donor 31	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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