Variant report

Variant	rs1480032
Chromosome Location	chr12:26302447-26302448
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10734754	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11048419	1.00[EUR][1000 genomes]
rs1471506	0.97[AFR][1000 genomes]
rs1871553	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1993972	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1993973	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2046066	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2256828	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2343074	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2343075	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2729629	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56686254	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7304527	0.84[EUR][1000 genomes]
rs7309947	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7955074	1.00[CEU][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:26288600-26306600	Weak transcription	Aorta	Aorta
2	chr12:26301400-26306000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr12:26302200-26303400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr12:26302200-26304600	Enhancers	Primary hematopoietic stem cells short term culture	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links