Variant report
| Variant | rs2256828 |
|---|---|
| Chromosome Location | chr12:26288488-26288489 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:26280600-26290200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr12:26286600-26288800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr12:26286600-26288800 | Enhancers | HMEC | breast |
| 4 | chr12:26287000-26290400 | Enhancers | Primary B cells from peripheral blood | blood |
| 5 | chr12:26287400-26288600 | Enhancers | Duodenum Mucosa | Duodenum |
| 6 | chr12:26287600-26288800 | Enhancers | NH-A | brain |
| 7 | chr12:26287600-26289600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 8 | chr12:26287800-26288600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 9 | chr12:26287800-26288600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 10 | chr12:26287800-26288600 | Enhancers | Lung | lung |
| 11 | chr12:26287800-26288600 | Enhancers | Pancreas | Pancrea |
| 12 | chr12:26287800-26288600 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 13 | chr12:26287800-26288600 | Enhancers | Right Atrium | heart |
| 14 | chr12:26287800-26288800 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 15 | chr12:26287800-26288800 | Enhancers | Fetal Muscle Leg | muscle |
| 16 | chr12:26287800-26288800 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 17 | chr12:26287800-26288800 | Enhancers | Small Intestine | intestine |
| 18 | chr12:26287800-26288800 | Enhancers | GM12878-XiMat | blood |
| 19 | chr12:26287800-26289000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 20 | chr12:26287800-26289200 | Enhancers | HSMM | muscle |
| 21 | chr12:26287800-26289400 | Enhancers | Brain Anterior Caudate | brain |
| 22 | chr12:26288000-26288600 | Enhancers | H1 Cell Line | embryonic stem cell |
| 23 | chr12:26288000-26288600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 24 | chr12:26288000-26288600 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 25 | chr12:26288000-26288600 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 26 | chr12:26288000-26288600 | Enhancers | Left Ventricle | heart |
| 27 | chr12:26288000-26288600 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 28 | chr12:26288000-26288600 | Enhancers | Osteobl | bone |
| 29 | chr12:26288000-26288800 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 30 | chr12:26288000-26288800 | Enhancers | Colon Smooth Muscle | Colon |
| 31 | chr12:26288000-26288800 | Enhancers | Fetal Heart | heart |
| 32 | chr12:26288000-26288800 | Enhancers | Ovary | ovary |
| 33 | chr12:26288000-26289400 | Enhancers | HSMMtube | muscle |
| 34 | chr12:26288200-26288600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 35 | chr12:26288200-26288600 | Enhancers | H9 Cell Line | embryonic stem cell |
| 36 | chr12:26288200-26288600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 37 | chr12:26288200-26288600 | Bivalent Enhancer | iPS-15b Cell Line | embryonic stem cell |
| 38 | chr12:26288200-26288600 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 39 | chr12:26288200-26288600 | Enhancers | Fetal Muscle Trunk | muscle |
| 40 | chr12:26288200-26288800 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 41 | chr12:26288200-26288800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 42 | chr12:26288200-26288800 | Enhancers | Colonic Mucosa | Colon |
| 43 | chr12:26288200-26289200 | Enhancers | Stomach Smooth Muscle | stomach |
| 44 | chr12:26288200-26289800 | Weak transcription | Fetal Intestine Small | intestine |
| 45 | chr12:26288400-26288600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 46 | chr12:26288400-26288600 | Enhancers | Aorta | Aorta |
| 47 | chr12:26288400-26288600 | Enhancers | Fetal Kidney | kidney |
| 48 | chr12:26288400-26288600 | Active TSS | Rectal Smooth Muscle | rectum |
| 49 | chr12:26288400-26290000 | Weak transcription | Fetal Intestine Large | intestine |
