Variant report

Variant	rs11835078
Chromosome Location	chr12:64749439-64749440
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs10459258	1.00[AMR][1000 genomes]
rs10459259	1.00[AMR][1000 genomes]
rs10735920	1.00[AMR][1000 genomes]
rs10735921	1.00[AMR][1000 genomes]
rs10735922	1.00[AMR][1000 genomes]
rs10878133	1.00[AMR][1000 genomes]
rs10878145	1.00[AMR][1000 genomes]
rs1162970	1.00[AMR][1000 genomes]
rs11830260	1.00[AMR][1000 genomes]
rs1436361	1.00[AMR][1000 genomes]
rs1469862	1.00[AMR][1000 genomes]
rs1657051	1.00[AMR][1000 genomes]
rs1708200	1.00[AMR][1000 genomes]
rs1865796	1.00[AMR][1000 genomes]
rs1898221	1.00[AMR][1000 genomes]
rs2082951	1.00[AMR][1000 genomes]
rs2335390	1.00[AMR][1000 genomes]
rs2453509	1.00[AMR][1000 genomes]
rs2575290	1.00[AMR][1000 genomes]
rs2575294	1.00[AMR][1000 genomes]
rs35744300	1.00[AMR][1000 genomes]
rs4237925	1.00[AMR][1000 genomes]
rs4522269	1.00[AMR][1000 genomes]
rs4572232	1.00[AMR][1000 genomes]
rs4763153	1.00[AMR][1000 genomes]
rs4763156	1.00[AMR][1000 genomes]
rs6421211	1.00[AMR][1000 genomes]
rs6581542	1.00[AMR][1000 genomes]
rs696658	1.00[AMR][1000 genomes]
rs696659	1.00[AMR][1000 genomes]
rs699629	1.00[AMR][1000 genomes]
rs699630	1.00[AMR][1000 genomes]
rs699631	1.00[AMR][1000 genomes]
rs699632	1.00[AMR][1000 genomes]
rs699635	1.00[AMR][1000 genomes]
rs699636	1.00[AMR][1000 genomes]
rs699637	1.00[AMR][1000 genomes]
rs699638	1.00[AMR][1000 genomes]
rs73315583	1.00[AMR][1000 genomes]
rs73315593	1.00[AMR][1000 genomes]
rs73315599	1.00[AMR][1000 genomes]
rs7488560	1.00[AMR][1000 genomes]
rs789723	1.00[AMR][1000 genomes]
rs789726	1.00[AMR][1000 genomes]
rs789727	1.00[AMR][1000 genomes]
rs789728	1.00[AMR][1000 genomes]
rs789730	1.00[AMR][1000 genomes]
rs789738	1.00[AMR][1000 genomes]
rs789742	1.00[AMR][1000 genomes]
rs789747	1.00[AMR][1000 genomes]
rs790013	1.00[AMR][1000 genomes]
rs790014	1.00[AMR][1000 genomes]
rs790017	1.00[AMR][1000 genomes]
rs7955105	1.00[AMR][1000 genomes]
rs7976524	1.00[AMR][1000 genomes]
rs813156	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3351487	chr12:64420364-64763950	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:64746600-64750200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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