The 2.0 version of rSNPBase

Variant report

Variant rs789747
Chromosome Location chr12:64568431-64568432
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:64563600-64574600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr12:64564000-64569000 Weak transcription Fetal Brain Male brain
3 chr12:64564200-64569200 Weak transcription Brain Cingulate Gyrus brain
4 chr12:64564200-64569200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr12:64564200-64569400 Weak transcription Brain Angular Gyrus brain
6 chr12:64564400-64569400 Weak transcription Brain Anterior Caudate brain
7 chr12:64564600-64568800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr12:64565600-64568800 Weak transcription Fetal Brain Female brain
9 chr12:64565600-64570800 Weak transcription HSMMtube muscle
10 chr12:64565800-64570800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr12:64565800-64575200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr12:64566000-64568800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr12:64566000-64569200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr12:64566000-64570600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr12:64566000-64574800 Weak transcription Placenta Amnion Placenta Amnion
16 chr12:64566200-64570800 Weak transcription NH-A brain
17 chr12:64566600-64568600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr12:64566600-64568600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:64566600-64570400 Weak transcription HUVEC blood vessel
20 chr12:64566600-64570600 Weak transcription NHLF lung
21 chr12:64566600-64571000 Weak transcription HSMM muscle
22 chr12:64566600-64571600 Weak transcription A549 lung
23 chr12:64566800-64571000 Weak transcription HMEC breast
24 chr12:64566800-64571400 Weak transcription Muscle Satellite Cultured Cells --
25 chr12:64566800-64571400 Weak transcription NHEK skin
26 chr12:64567000-64571000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr12:64567000-64571200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr12:64567200-64571600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:64567600-64568600 Weak transcription NHDF-Ad bronchial
30 chr12:64567600-64569000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr12:64567600-64570600 Weak transcription Osteobl bone
32 chr12:64567800-64569400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr12:64567800-64570200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr12:64567800-64573800 Weak transcription Hela-S3 cervix
35 chr12:64567800-64585600 Weak transcription Fetal Intestine Small intestine
36 chr12:64568000-64568600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr12:64568400-64569200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015