The 2.0 version of rSNPBase

Variant report

Variant rs789728
Chromosome Location chr12:64513344-64513345
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:64474800-64521400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr12:64477400-64520800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr12:64483000-64521400 Weak transcription Liver Liver
4 chr12:64483200-64520800 Weak transcription Brain Cingulate Gyrus brain
5 chr12:64483200-64521400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr12:64483600-64519800 Weak transcription Gastric stomach
7 chr12:64483600-64521400 Weak transcription Lung lung
8 chr12:64487400-64526600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr12:64491800-64523600 Weak transcription HUVEC blood vessel
10 chr12:64492400-64515400 Weak transcription Brain Anterior Caudate brain
11 chr12:64493000-64515800 Weak transcription Brain Hippocampus Middle brain
12 chr12:64493200-64523600 Weak transcription Brain Angular Gyrus brain
13 chr12:64493600-64518800 Weak transcription Fetal Brain Male brain
14 chr12:64494000-64514200 Weak transcription Hela-S3 cervix
15 chr12:64494000-64521400 Weak transcription Psoas Muscle Psoas
16 chr12:64494200-64521400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr12:64496400-64520800 Weak transcription Spleen Spleen
18 chr12:64498400-64538400 Weak transcription Small Intestine intestine
19 chr12:64498600-64521400 Weak transcription NH-A brain
20 chr12:64499000-64521400 Weak transcription Rectal Smooth Muscle rectum
21 chr12:64499800-64514000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr12:64503200-64521400 Weak transcription Brain Substantia Nigra brain
23 chr12:64504000-64519800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr12:64504200-64515800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr12:64504200-64520800 Weak transcription Right Ventricle heart
26 chr12:64504400-64519800 Weak transcription Fetal Muscle Leg muscle
27 chr12:64505000-64518000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr12:64505800-64519600 Weak transcription Left Ventricle heart
29 chr12:64506200-64521200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr12:64506400-64521400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr12:64506600-64527000 Weak transcription Colon Smooth Muscle Colon
32 chr12:64506800-64519600 Weak transcription Adipose Nuclei Adipose
33 chr12:64506800-64521400 Weak transcription Duodenum Mucosa Duodenum
34 chr12:64506800-64521400 Weak transcription Fetal Kidney kidney
35 chr12:64506800-64521400 Weak transcription Fetal Lung lung
36 chr12:64506800-64527200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr12:64508200-64514000 Weak transcription HMEC breast
38 chr12:64509400-64519600 Weak transcription HSMMtube muscle
39 chr12:64509600-64514000 Weak transcription NHEK skin
40 chr12:64510000-64519600 Weak transcription Ovary ovary
41 chr12:64510200-64519800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr12:64510200-64519800 Weak transcription Fetal Muscle Trunk muscle
43 chr12:64510600-64515400 Weak transcription Osteobl bone
44 chr12:64510600-64521400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr12:64510600-64527200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr12:64510800-64514000 Weak transcription A549 lung
47 chr12:64510800-64518200 Weak transcription NHDF-Ad bronchial
48 chr12:64510800-64519600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr12:64510800-64519800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr12:64510800-64520800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015