The 2.0 version of rSNPBase

Variant report

Variant rs11857295
Chromosome Location chr15:34588076-34588077
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34547600-34591200 Weak transcription Aorta Aorta
2 chr15:34548200-34592600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr15:34551200-34608800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr15:34555200-34606600 Weak transcription Thymus Thymus
5 chr15:34577600-34590800 Weak transcription Primary T cells from cord blood blood
6 chr15:34577600-34608800 Weak transcription Duodenum Mucosa Duodenum
7 chr15:34577600-34610200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr15:34577800-34589600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr15:34577800-34593200 Weak transcription HepG2 liver
10 chr15:34577800-34608800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr15:34578000-34589600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr15:34578200-34606800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr15:34579000-34603800 Weak transcription Primary T cells fromperipheralblood blood
14 chr15:34582200-34599000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:34582600-34609600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr15:34582600-34610200 Weak transcription Fetal Lung lung
17 chr15:34583200-34588800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr15:34583400-34588800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr15:34583400-34609600 Weak transcription Adipose Nuclei Adipose
20 chr15:34583600-34593600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr15:34583800-34610600 Weak transcription Pancreas Pancrea
22 chr15:34584600-34588800 Weak transcription Rectal Smooth Muscle rectum
23 chr15:34584800-34589200 Weak transcription Colon Smooth Muscle Colon
24 chr15:34585000-34588800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr15:34585000-34609600 Weak transcription Spleen Spleen
26 chr15:34585000-34610600 Weak transcription Lung lung
27 chr15:34585200-34588600 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr15:34585200-34588800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr15:34585200-34589600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr15:34585200-34589600 Weak transcription Primary B cells from peripheral blood blood
31 chr15:34585200-34589600 Weak transcription Left Ventricle heart
32 chr15:34585200-34596400 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr15:34585200-34598600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr15:34585200-34609600 Weak transcription Fetal Stomach stomach
35 chr15:34585200-34615600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:34585400-34589200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr15:34585400-34602200 Weak transcription Esophagus oesophagus
38 chr15:34585400-34608600 Weak transcription Liver Liver
39 chr15:34585800-34588800 Weak transcription Hela-S3 cervix
40 chr15:34585800-34590400 Weak transcription Right Ventricle heart
41 chr15:34585800-34604600 Weak transcription Fetal Intestine Large intestine
42 chr15:34585800-34610400 Weak transcription Ovary ovary
43 chr15:34586400-34592800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr15:34586600-34588800 Weak transcription Psoas Muscle Psoas
45 chr15:34586600-34609800 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr15:34587000-34610200 Weak transcription Fetal Intestine Small intestine
47 chr15:34587400-34592000 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr15:34587600-34588800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr15:34587600-34589000 Strong transcription GM12878-XiMat blood
50 chr15:34587600-34589400 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015