Variant report
| Variant | rs11883398 |
|---|---|
| Chromosome Location | chr19:44563060-44563061 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:44556600-44564600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 2 | chr19:44557000-44565000 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr19:44557000-44566800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 4 | chr19:44557000-44567400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr19:44557000-44567400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 6 | chr19:44557000-44567600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 7 | chr19:44557000-44568800 | Weak transcription | HMEC | breast |
| 8 | chr19:44557000-44570200 | Weak transcription | HUVEC | blood vessel |
| 9 | chr19:44557000-44570200 | Weak transcription | NHDF-Ad | bronchial |
| 10 | chr19:44557000-44575600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 11 | chr19:44557200-44565600 | Weak transcription | NHLF | lung |
| 12 | chr19:44557400-44564400 | Weak transcription | Fetal Heart | heart |
| 13 | chr19:44557400-44565000 | Weak transcription | Small Intestine | intestine |
| 14 | chr19:44557400-44565000 | Weak transcription | NH-A | brain |
| 15 | chr19:44557400-44570000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 16 | chr19:44557400-44570200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 17 | chr19:44557600-44564800 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr19:44558200-44571800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 19 | chr19:44558200-44573200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 20 | chr19:44558200-44575600 | ZNF genes & repeats | Liver | Liver |
| 21 | chr19:44558800-44563800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 22 | chr19:44558800-44567800 | Strong transcription | Stomach Smooth Muscle | stomach |
| 23 | chr19:44558800-44572800 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 24 | chr19:44559000-44565200 | ZNF genes & repeats | Primary monocytes fromperipheralblood | blood |
| 25 | chr19:44559200-44569000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr19:44559200-44569000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 27 | chr19:44559200-44569400 | Strong transcription | Fetal Stomach | stomach |
| 28 | chr19:44559400-44565400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 29 | chr19:44559400-44565800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 30 | chr19:44559400-44569400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr19:44559400-44570000 | Weak transcription | Stomach Mucosa | stomach |
| 32 | chr19:44559600-44563600 | Strong transcription | Adipose Nuclei | Adipose |
| 33 | chr19:44559600-44565800 | Strong transcription | Colonic Mucosa | Colon |
| 34 | chr19:44559800-44563200 | Strong transcription | Colon Smooth Muscle | Colon |
| 35 | chr19:44559800-44563600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 36 | chr19:44559800-44568600 | Strong transcription | HSMMtube | muscle |
| 37 | chr19:44560000-44563600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 38 | chr19:44560000-44568800 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 39 | chr19:44560200-44567200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 40 | chr19:44560400-44563200 | Weak transcription | Fetal Kidney | kidney |
| 41 | chr19:44560400-44564600 | Weak transcription | Primary B cells from cord blood | blood |
| 42 | chr19:44560400-44564600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 43 | chr19:44560400-44566400 | Weak transcription | Fetal Thymus | thymus |
| 44 | chr19:44560400-44566800 | Weak transcription | NHEK | skin |
| 45 | chr19:44560800-44569400 | Strong transcription | Fetal Intestine Large | intestine |
| 46 | chr19:44560800-44570000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 47 | chr19:44561000-44568800 | Strong transcription | Fetal Brain Female | brain |
| 48 | chr19:44561000-44569200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 49 | chr19:44561200-44569600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 50 | chr19:44561400-44568400 | Strong transcription | Brain Angular Gyrus | brain |
