The 2.0 version of rSNPBase

Variant report

Variant rs11883052
Chromosome Location chr19:44557739-44557740
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44556600-44559400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr19:44556600-44564600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr19:44557000-44558600 Weak transcription A549 lung
4 chr19:44557000-44558800 Weak transcription Primary B cells from cord blood blood
5 chr19:44557000-44558800 Weak transcription Primary B cells from peripheral blood blood
6 chr19:44557000-44558800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr19:44557000-44558800 Weak transcription Stomach Mucosa stomach
8 chr19:44557000-44558800 Weak transcription Osteobl bone
9 chr19:44557000-44559000 Weak transcription Primary T cells fromperipheralblood blood
10 chr19:44557000-44559200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr19:44557000-44559200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr19:44557000-44559600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr19:44557000-44559800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr19:44557000-44560000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr19:44557000-44560000 Weak transcription Gastric stomach
16 chr19:44557000-44560200 Weak transcription Fetal Thymus thymus
17 chr19:44557000-44560200 Weak transcription Thymus Thymus
18 chr19:44557000-44561800 Weak transcription H1 Cell Line embryonic stem cell
19 chr19:44557000-44561800 Weak transcription H9 Cell Line embryonic stem cell
20 chr19:44557000-44561800 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr19:44557000-44561800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr19:44557000-44561800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr19:44557000-44561800 Weak transcription Aorta Aorta
24 chr19:44557000-44561800 Weak transcription Placenta Placenta
25 chr19:44557000-44565000 Weak transcription Psoas Muscle Psoas
26 chr19:44557000-44566800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:44557000-44567400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr19:44557000-44567400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr19:44557000-44567600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr19:44557000-44568800 Weak transcription HMEC breast
31 chr19:44557000-44570200 Weak transcription HUVEC blood vessel
32 chr19:44557000-44570200 Weak transcription NHDF-Ad bronchial
33 chr19:44557000-44575600 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr19:44557200-44557800 Enhancers Fetal Brain Female brain
35 chr19:44557200-44558600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr19:44557200-44558600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr19:44557200-44558600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr19:44557200-44558600 Weak transcription Fetal Lung lung
39 chr19:44557200-44558800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr19:44557200-44558800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr19:44557200-44558800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr19:44557200-44558800 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr19:44557200-44558800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr19:44557200-44558800 Weak transcription Adipose Nuclei Adipose
45 chr19:44557200-44558800 Weak transcription Colonic Mucosa Colon
46 chr19:44557200-44558800 Weak transcription Fetal Kidney kidney
47 chr19:44557200-44558800 Weak transcription Stomach Smooth Muscle stomach
48 chr19:44557200-44559000 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr19:44557200-44559000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr19:44557200-44559000 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015