The 2.0 version of rSNPBase

Variant report

Variant rs10420015
Chromosome Location chr19:44629638-44629639
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44618200-44635000 Weak transcription Stomach Mucosa stomach
2 chr19:44618600-44631400 Weak transcription NHEK skin
3 chr19:44618600-44635000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr19:44618800-44635000 Weak transcription HMEC breast
5 chr19:44619000-44633600 Weak transcription HUVEC blood vessel
6 chr19:44619600-44630400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr19:44619600-44633200 Strong transcription Skeletal Muscle Female skeletal muscle
8 chr19:44619600-44637200 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr19:44619600-44638600 ZNF genes & repeats Liver Liver
10 chr19:44619800-44630600 Strong transcription Duodenum Mucosa Duodenum
11 chr19:44619800-44635000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr19:44620000-44634600 Strong transcription Brain Hippocampus Middle brain
13 chr19:44620000-44635400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr19:44620400-44635000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr19:44620400-44635000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr19:44621200-44630200 Strong transcription Primary T helper naive cells fromperipheralblood blood
17 chr19:44621600-44631000 Strong transcription Primary B cells from peripheral blood blood
18 chr19:44622800-44636800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:44622800-44645000 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr19:44623400-44637200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
21 chr19:44623400-44637800 ZNF genes & repeats Adipose Nuclei Adipose
22 chr19:44623400-44638800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr19:44623600-44633600 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr19:44623800-44630400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr19:44623800-44630400 Weak transcription HSMMtube muscle
26 chr19:44623800-44631200 Weak transcription H9 Cell Line embryonic stem cell
27 chr19:44623800-44635000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:44623800-44640600 Weak transcription HepG2 liver
29 chr19:44624000-44630400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr19:44624000-44630400 Weak transcription Pancreas Pancrea
31 chr19:44624000-44631000 Weak transcription H1 Cell Line embryonic stem cell
32 chr19:44624000-44632000 Weak transcription Fetal Brain Male brain
33 chr19:44624000-44635000 Weak transcription Fetal Heart heart
34 chr19:44624200-44630200 Weak transcription Muscle Satellite Cultured Cells --
35 chr19:44624200-44630400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr19:44624200-44630400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr19:44624200-44630400 Weak transcription Esophagus oesophagus
38 chr19:44624200-44632200 Weak transcription NH-A brain
39 chr19:44624200-44637400 ZNF genes & repeats Fetal Lung lung
40 chr19:44624600-44630400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr19:44624600-44630400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr19:44624600-44630400 Weak transcription Aorta Aorta
43 chr19:44624600-44630400 Weak transcription NHLF lung
44 chr19:44624800-44630200 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr19:44624800-44630600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr19:44624800-44635800 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr19:44625000-44630000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr19:44625000-44630200 Weak transcription Fetal Thymus thymus
49 chr19:44625000-44630200 Weak transcription Osteobl bone
50 chr19:44625000-44632000 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015