Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:55293555..55295689-chr2:55296862..55299716,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10496040	1.00[LWK][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs11887323	0.88[YRI][hapmap];0.86[AFR][1000 genomes]
rs11892015	1.00[AMR][1000 genomes]
rs11895689	0.85[AMR][1000 genomes]
rs11899197	1.00[AMR][1000 genomes]
rs11899295	0.94[LWK][hapmap];1.00[AMR][1000 genomes]
rs15028	1.00[AMR][1000 genomes]
rs17046545	0.89[LWK][hapmap];1.00[AMR][1000 genomes]
rs17046564	1.00[AMR][1000 genomes]
rs17046658	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs2028728	0.87[YRI][hapmap];0.90[AFR][1000 genomes]
rs2864047	0.85[AMR][1000 genomes]
rs2864048	0.85[AMR][1000 genomes]
rs4672011	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs58156158	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936506	0.85[AMR][1000 genomes]
rs73936508	0.85[AMR][1000 genomes]
rs73936512	1.00[AMR][1000 genomes]
rs73936517	1.00[AMR][1000 genomes]
rs73936518	1.00[AMR][1000 genomes]
rs73936821	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936824	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs957920	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874155	chr2:55205262-55307646	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55293000-55298400	Weak transcription	K562	blood
2	chr2:55296000-55297400	Enhancers	Fetal Heart	heart
3	chr2:55296800-55297000	Enhancers	HepG2	liver

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