The 2.0 version of rSNPBase

Variant report

Variant rs11890754
Chromosome Location chr2:37488864-37488865
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37460000-37495600 Weak transcription Small Intestine intestine
2 chr2:37460000-37501600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:37460200-37528600 Weak transcription Stomach Mucosa stomach
4 chr2:37460400-37492200 Weak transcription Fetal Heart heart
5 chr2:37460400-37498600 Weak transcription Gastric stomach
6 chr2:37460600-37493400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:37460600-37498600 Weak transcription Spleen Spleen
8 chr2:37461000-37489800 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr2:37461200-37518800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:37463400-37509600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr2:37463600-37489600 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr2:37464400-37489600 Strong transcription Liver Liver
13 chr2:37465000-37489600 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr2:37467600-37530200 Weak transcription Pancreas Pancrea
15 chr2:37468400-37492400 Strong transcription NH-A brain
16 chr2:37470400-37498600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr2:37470400-37521600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:37470600-37493400 Weak transcription Fetal Intestine Small intestine
19 chr2:37470800-37521400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr2:37471000-37490000 Strong transcription Fetal Thymus thymus
21 chr2:37471600-37490200 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr2:37475600-37491000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:37476800-37501400 Weak transcription Esophagus oesophagus
24 chr2:37477400-37502200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr2:37478600-37489400 Strong transcription Primary T cells from cord blood blood
26 chr2:37478800-37489400 Strong transcription Left Ventricle heart
27 chr2:37478800-37491200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:37479400-37520600 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr2:37479800-37501600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr2:37480600-37505000 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr2:37481600-37500800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr2:37482000-37489600 Weak transcription GM12878-XiMat blood
33 chr2:37482600-37497800 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr2:37482600-37501800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr2:37482800-37498600 Weak transcription Lung lung
36 chr2:37482800-37528600 Weak transcription Brain Cingulate Gyrus brain
37 chr2:37483200-37492400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:37483400-37492200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr2:37483400-37498600 Weak transcription HSMMtube muscle
40 chr2:37483600-37498600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:37484000-37495400 Weak transcription Thymus Thymus
42 chr2:37484200-37501600 Weak transcription K562 blood
43 chr2:37484200-37539000 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr2:37484400-37491000 Weak transcription Fetal Brain Female brain
45 chr2:37484400-37511600 Weak transcription Fetal Brain Male brain
46 chr2:37484600-37498600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:37484600-37498600 Weak transcription NHEK skin
48 chr2:37484600-37500000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr2:37484600-37500400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr2:37484600-37501400 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015