Variant report

Variant	rs11891814
Chromosome Location	chr2:86241051-86241052
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10185778	1.00[EUR][1000 genomes]
rs1124687	1.00[EUR][1000 genomes]
rs11845	1.00[EUR][1000 genomes]
rs11884765	1.00[EUR][1000 genomes]
rs11888445	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11891306	1.00[EUR][1000 genomes]
rs11895510	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11900783	1.00[AMR][1000 genomes]
rs11901601	1.00[EUR][1000 genomes]
rs11902617	1.00[EUR][1000 genomes]
rs17026940	1.00[EUR][1000 genomes]
rs17027017	1.00[EUR][1000 genomes]
rs17027032	1.00[EUR][1000 genomes]
rs2228352	1.00[EUR][1000 genomes]
rs6710042	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6724856	1.00[EUR][1000 genomes]
rs6734409	1.00[EUR][1000 genomes]
rs725047	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72934506	1.00[EUR][1000 genomes]
rs7592378	1.00[EUR][1000 genomes]
rs7593975	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7608823	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001104	chr2:86182021-86271923	Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv535807	chr2:86182021-86271923	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86239600-86244000	Weak transcription	Pancreas	Pancrea
2	chr2:86239800-86242600	Weak transcription	Psoas Muscle	Psoas
3	chr2:86240200-86242400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr2:86240800-86242000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
5	chr2:86240800-86242200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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