The 2.0 version of rSNPBase

Variant report

Variant rs7593975
Chromosome Location chr2:86161602-86161603
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86152200-86163400 Weak transcription Fetal Muscle Trunk muscle
2 chr2:86152400-86163000 Weak transcription Rectal Smooth Muscle rectum
3 chr2:86152800-86162400 Weak transcription Right Atrium heart
4 chr2:86154800-86162800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr2:86155000-86162600 Weak transcription Brain Angular Gyrus brain
6 chr2:86155000-86162600 Weak transcription Brain Cingulate Gyrus brain
7 chr2:86155200-86162600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr2:86156400-86163600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr2:86156600-86163200 Enhancers Hela-S3 cervix
10 chr2:86157800-86162400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr2:86157800-86162600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr2:86157800-86163000 Weak transcription Pancreas Pancrea
13 chr2:86157800-86163000 Weak transcription Spleen Spleen
14 chr2:86157800-86163200 Weak transcription Placenta Amnion Placenta Amnion
15 chr2:86158000-86162600 Weak transcription Brain Hippocampus Middle brain
16 chr2:86158200-86162400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr2:86158200-86162600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:86159200-86161800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr2:86159200-86161800 Enhancers Primary T cells from cord blood blood
20 chr2:86160400-86161800 Enhancers Adipose Nuclei Adipose
21 chr2:86160400-86163800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr2:86160400-86163800 Enhancers Osteobl bone
23 chr2:86160400-86164800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr2:86160600-86162000 Enhancers HMEC breast
25 chr2:86160600-86164600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:86160800-86161800 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr2:86160800-86161800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr2:86160800-86163400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:86160800-86163800 Enhancers HUVEC blood vessel
30 chr2:86160800-86164000 Enhancers NH-A brain
31 chr2:86160800-86166800 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr2:86161000-86163600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr2:86161000-86164000 Enhancers NHEK skin
34 chr2:86161000-86164200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr2:86161200-86163600 Weak transcription Right Ventricle heart
36 chr2:86161400-86161800 Flanking Active TSS K562 blood
37 chr2:86161400-86162000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:86161400-86162000 Enhancers HSMM muscle
39 chr2:86161400-86162400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr2:86161400-86162400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:86161400-86162600 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr2:86161400-86162800 Enhancers Muscle Satellite Cultured Cells --
43 chr2:86161400-86162800 Weak transcription Liver Liver
44 chr2:86161400-86163000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:86161400-86163000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:86161400-86163000 Weak transcription Fetal Muscle Leg muscle
47 chr2:86161400-86163400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr2:86161400-86163600 Weak transcription Placenta Placenta
49 chr2:86161400-86164600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:86161400-86166200 Weak transcription Ovary ovary

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Last update: Aug 31, 2015