Variant report

Variant	rs11911631
Chromosome Location	chr21:16191900-16191901
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10482859	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11910518	1.00[EUR][1000 genomes]
rs11910774	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17004297	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17004324	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17464760	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2822852	1.00[EUR][1000 genomes]
rs2822921	1.00[EUR][1000 genomes]
rs2822926	1.00[EUR][1000 genomes]
rs7275506	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7278150	1.00[EUR][1000 genomes]
rs7282147	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7282632	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7283881	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73344264	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73892018	1.00[EUR][1000 genomes]
rs73892019	1.00[EUR][1000 genomes]
rs8127892	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8132587	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869911	chr21:16184645-16210579	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16191600-16193200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr21:16191800-16193200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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