Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16199164..16202875-chr21:16203134..16206995,5	K562	blood:

Variant related genes	Relation type
ENSG00000226406	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10482859	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11909720	0.91[YRI][hapmap]
rs11910518	1.00[EUR][1000 genomes]
rs11910774	0.91[YRI][hapmap];0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11911422	0.90[YRI][hapmap]
rs11911631	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17004297	0.95[YRI][hapmap];0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17004324	1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17464760	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1882866	0.91[YRI][hapmap]
rs2822852	1.00[EUR][1000 genomes]
rs2822921	1.00[EUR][1000 genomes]
rs2822926	1.00[EUR][1000 genomes]
rs7275506	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7278150	1.00[EUR][1000 genomes]
rs7282147	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7282632	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7283881	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73344264	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73892018	1.00[EUR][1000 genomes]
rs73892019	1.00[EUR][1000 genomes]
rs8127892	0.95[YRI][hapmap];0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869911	chr21:16184645-16210579	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16199200-16204600	Weak transcription	K562	blood

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