Variant report

No.	Distal block	Cell Line	Cell type
1	chr3:138843422..138845393-chr3:138848621..138851312,3	K562	blood:
2	chr3:138847852..138850374-chr3:138879997..138881522,2	K562	blood:
3	chr3:138847994..138851900-chr3:138852497..138855700,4	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10935306	0.96[ASN][1000 genomes]
rs11919334	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11919416	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11928890	0.88[ASN][1000 genomes]
rs12632107	0.82[EUR][1000 genomes]
rs12632125	0.81[EUR][1000 genomes]
rs13067012	0.82[EUR][1000 genomes]
rs13068617	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13069247	0.88[ASN][1000 genomes]
rs13074693	0.88[ASN][1000 genomes]
rs13083364	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13086745	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13089589	0.82[EUR][1000 genomes]
rs13100625	0.85[ASN][1000 genomes]
rs4365652	0.80[EUR][1000 genomes]
rs4894381	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4894382	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4894383	0.82[EUR][1000 genomes]
rs4894384	0.80[EUR][1000 genomes]
rs4894397	0.88[ASN][1000 genomes]
rs7623750	0.82[EUR][1000 genomes]
rs7626912	0.82[EUR][1000 genomes]
rs7627087	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829736	chr3:138737352-138934758	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:138847400-138853000	Weak transcription	HMEC	breast
2	chr3:138848000-138850600	Weak transcription	K562	blood
3	chr3:138848800-138850400	Weak transcription	HSMMtube	muscle
4	chr3:138849200-138851600	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr3:138849400-138854600	Weak transcription	Pancreas	Pancrea

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