Variant report

Variant	rs11932231
Chromosome Location	chr4:91904830-91904831
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11724350	1.00[ASN][1000 genomes]
rs11725835	1.00[ASN][1000 genomes]
rs11727332	0.92[ASN][1000 genomes]
rs11728122	1.00[ASN][1000 genomes]
rs11728310	0.92[ASN][1000 genomes]
rs11730640	1.00[AMR][1000 genomes]
rs11730705	1.00[AMR][1000 genomes]
rs11735166	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1461600	1.00[ASN][1000 genomes]
rs58387923	1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6833255	0.89[ASN][1000 genomes]
rs72884736	1.00[ASN][1000 genomes]
rs73834706	1.00[AMR][1000 genomes]
rs73834707	1.00[AMR][1000 genomes]
rs73834710	1.00[ASN][1000 genomes]
rs73834723	0.96[ASN][1000 genomes]
rs73834724	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879555	chr4:91743538-91967602	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv491945	chr4:91753638-92240582	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv10533	chr4:91842776-91935992	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv998409	chr4:91888883-91915429	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv879556	chr4:91889469-91941029	Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv879557	chr4:91903868-91954105	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91904200-91905800	Enhancers	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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