The 2.0 version of rSNPBase

Variant report

Variant rs11938650
Chromosome Location chr4:103942796-103942797
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:103940000-103950600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr4:103941000-103953800 Weak transcription Gastric stomach
3 chr4:103941200-103944200 Weak transcription Spleen Spleen
4 chr4:103941400-103945200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:103941400-103946200 Weak transcription Left Ventricle heart
6 chr4:103941400-103946600 Weak transcription NHDF-Ad bronchial
7 chr4:103941400-103948400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr4:103941400-103949800 Weak transcription Colon Smooth Muscle Colon
9 chr4:103941400-103950400 Weak transcription Fetal Brain Female brain
10 chr4:103941400-103951200 Weak transcription Fetal Heart heart
11 chr4:103941400-103951400 Weak transcription HepG2 liver
12 chr4:103941400-103953800 Weak transcription Brain Germinal Matrix brain
13 chr4:103941400-103957200 Weak transcription Fetal Brain Male brain
14 chr4:103941400-103964400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr4:103941400-103964800 Weak transcription HSMM muscle
16 chr4:103941400-103965200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr4:103941400-103967200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr4:103941400-103967800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:103941400-103968000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr4:103941400-103968000 Weak transcription Fetal Muscle Trunk muscle
21 chr4:103941400-103969000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr4:103941400-103969200 Weak transcription Muscle Satellite Cultured Cells --
23 chr4:103941400-103974000 Weak transcription Esophagus oesophagus
24 chr4:103941400-103975200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr4:103941400-103989400 Weak transcription NH-A brain
26 chr4:103941400-103996600 Weak transcription Lung lung
27 chr4:103941600-103944000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr4:103941600-103945400 Weak transcription Liver Liver
29 chr4:103941600-103946000 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr4:103941600-103946800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr4:103941600-103947200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr4:103941600-103950200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr4:103941600-103951400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr4:103941600-103952600 Weak transcription Hela-S3 cervix
35 chr4:103941600-103957000 Weak transcription Ovary ovary
36 chr4:103941600-103957000 Weak transcription Stomach Smooth Muscle stomach
37 chr4:103941600-103963000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr4:103941600-103965400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr4:103941600-103965400 Weak transcription NHEK skin
40 chr4:103941600-103968000 Weak transcription Fetal Muscle Leg muscle
41 chr4:103941600-103969200 Weak transcription Adipose Nuclei Adipose
42 chr4:103941600-103969200 Weak transcription Fetal Thymus thymus
43 chr4:103941600-103989000 Weak transcription HMEC breast
44 chr4:103941800-103946000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr4:103941800-103946200 Weak transcription Primary B cells from cord blood blood
46 chr4:103941800-103946800 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr4:103941800-103947200 Weak transcription Primary hematopoietic stem cells blood
48 chr4:103941800-103947200 Weak transcription Brain Angular Gyrus brain
49 chr4:103941800-103951600 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr4:103941800-103953800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015