Variant report

Variant	rs11941577
Chromosome Location	chr4:74323242-74323243
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs13132873	1.00[ASN][1000 genomes]
rs1406499	1.00[ASN][1000 genomes]
rs1919480	1.00[ASN][1000 genomes]
rs2463883	1.00[ASN][1000 genomes]
rs41265655	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs41265663	1.00[ASN][1000 genomes]
rs41265665	1.00[ASN][1000 genomes]
rs4333154	1.00[ASN][1000 genomes]
rs56247162	0.80[EUR][1000 genomes]
rs56309753	0.88[EUR][1000 genomes]
rs59640098	1.00[ASN][1000 genomes]
rs59879767	1.00[ASN][1000 genomes]
rs6446943	1.00[ASN][1000 genomes]
rs66841185	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs67272461	0.86[AFR][1000 genomes]
rs67784283	0.80[EUR][1000 genomes]
rs68003823	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6813414	1.00[ASN][1000 genomes]
rs6818282	1.00[ASN][1000 genomes]
rs6848823	1.00[ASN][1000 genomes]
rs6853402	1.00[ASN][1000 genomes]
rs6855652	1.00[ASN][1000 genomes]
rs72647033	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72853185	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72856610	1.00[ASN][1000 genomes]
rs72856614	1.00[ASN][1000 genomes]
rs72856618	1.00[ASN][1000 genomes]
rs72856622	1.00[ASN][1000 genomes]
rs72856634	1.00[ASN][1000 genomes]
rs72856638	1.00[ASN][1000 genomes]
rs72856640	1.00[ASN][1000 genomes]
rs72856641	1.00[ASN][1000 genomes]
rs72856648	1.00[ASN][1000 genomes]
rs72856650	1.00[ASN][1000 genomes]
rs72856656	1.00[ASN][1000 genomes]
rs72856662	1.00[ASN][1000 genomes]
rs72856664	1.00[ASN][1000 genomes]
rs72856685	1.00[ASN][1000 genomes]
rs72856690	1.00[ASN][1000 genomes]
rs72856699	1.00[ASN][1000 genomes]
rs72858926	1.00[ASN][1000 genomes]
rs72858930	1.00[ASN][1000 genomes]
rs72858933	1.00[ASN][1000 genomes]
rs72858937	1.00[ASN][1000 genomes]
rs72858939	1.00[ASN][1000 genomes]
rs72858993	1.00[ASN][1000 genomes]
rs72863008	1.00[ASN][1000 genomes]
rs72863014	1.00[ASN][1000 genomes]
rs72863061	1.00[ASN][1000 genomes]
rs72863074	1.00[ASN][1000 genomes]
rs72863084	1.00[ASN][1000 genomes]
rs72863086	1.00[ASN][1000 genomes]
rs72863093	1.00[ASN][1000 genomes]
rs72865421	1.00[ASN][1000 genomes]
rs72865434	1.00[ASN][1000 genomes]
rs72865438	1.00[ASN][1000 genomes]
rs72865440	1.00[ASN][1000 genomes]
rs72865454	1.00[ASN][1000 genomes]
rs72865456	1.00[ASN][1000 genomes]
rs72865458	1.00[ASN][1000 genomes]
rs7356188	1.00[ASN][1000 genomes]
rs7663473	1.00[ASN][1000 genomes]
rs7663880	1.00[ASN][1000 genomes]
rs7680894	1.00[ASN][1000 genomes]
rs7681278	1.00[ASN][1000 genomes]
rs7698909	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3430875	chr4:74243646-74420354	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:74319600-74324400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:74322400-74323600	Weak transcription	HepG2	liver
3	chr4:74322800-74324400	Weak transcription	Fetal Intestine Small	intestine
4	chr4:74322800-74328000	Weak transcription	Fetal Intestine Large	intestine

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