Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10751168	0.92[CEU][hapmap]
rs10751169	1.00[CEU][hapmap];0.86[JPT][hapmap]
rs10751171	0.82[ASN][1000 genomes]
rs10751173	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10751174	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10898751	0.82[ASN][1000 genomes]
rs10898758	0.82[ASN][1000 genomes]
rs1194876	0.89[JPT][hapmap];0.81[ASN][1000 genomes]
rs2000797	0.85[ASN][1000 genomes]
rs2097037	0.80[EUR][1000 genomes]
rs2097040	0.91[CEU][hapmap]
rs2226842	0.90[JPT][hapmap]
rs3892758	0.81[EUR][1000 genomes]
rs4533056	0.80[ASN][1000 genomes]
rs4641509	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4944745	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4944746	0.86[ASN][1000 genomes]
rs6592396	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs7127034	0.80[EUR][1000 genomes]
rs7127893	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043562	chr11:86755535-87547185	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv541120	chr11:86755535-87547185	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv555714	chr11:87058981-87399218	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1039172	chr11:87068731-87385458	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv898075	chr11:87278074-87375119	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:87373200-87374000	Enhancers	Fetal Brain Female	brain

Quick Search: