Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10038064	0.83[ASN][1000 genomes]
rs10038307	0.91[ASN][1000 genomes]
rs10039819	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10043199	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10045612	0.83[ASN][1000 genomes]
rs10059259	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10065249	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10068399	0.88[ASN][1000 genomes]
rs10479181	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10479183	0.85[ASN][1000 genomes]
rs10515282	1.00[ASN][1000 genomes]
rs11950934	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs13361670	0.83[ASN][1000 genomes]
rs1421633	0.83[ASN][1000 genomes]
rs1421634	0.83[ASN][1000 genomes]
rs154197	1.00[JPT][hapmap]
rs17166201	0.83[ASN][1000 genomes]
rs17661925	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2112145	0.83[ASN][1000 genomes]
rs27032	0.88[JPT][hapmap]
rs3907829	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4018045	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs468238	1.00[JPT][hapmap]
rs57871526	0.82[ASN][1000 genomes]
rs59126397	0.83[ASN][1000 genomes]
rs6883625	0.83[ASN][1000 genomes]
rs73149511	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7444475	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7728547	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7729850	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032060	chr5:98022226-98093492	Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv537817	chr5:98022226-98093492	Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:98041600-98044200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr5:98041600-98048800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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