Variant report

Variant	rs11953346
Chromosome Location	chr5:94141447-94141448
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10041551	0.82[ASW][hapmap]
rs10056977	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10059194	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10066070	0.96[CEU][hapmap];1.00[CHB][hapmap];0.97[GIH][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.90[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11740749	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs153851	0.82[JPT][hapmap]
rs153852	0.82[JPT][hapmap]
rs17084024	1.00[CHB][hapmap]
rs293032	0.82[ASW][hapmap];1.00[CHB][hapmap];0.82[ASN][1000 genomes]
rs293061	1.00[CHB][hapmap];0.93[ASN][1000 genomes]
rs36727	0.82[JPT][hapmap]
rs72775332	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130200-94161600	Weak transcription	HUVEC	blood vessel
2	chr5:94130400-94141600	Weak transcription	Adipose Nuclei	Adipose
3	chr5:94130400-94145000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr5:94134600-94145400	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr5:94134600-94164000	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr5:94137600-94170400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr5:94140200-94163800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr5:94141400-94141600	Enhancers	Fetal Thymus	thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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