The 2.0 version of rSNPBase

Variant report

Variant rs11956097
Chromosome Location chr5:14729909-14729910
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:14714200-14740800 Weak transcription Colon Smooth Muscle Colon
2 chr5:14715000-14744200 Weak transcription GM12878-XiMat blood
3 chr5:14715200-14736200 Weak transcription Pancreas Pancrea
4 chr5:14715200-14737400 Weak transcription Spleen Spleen
5 chr5:14716000-14730600 Weak transcription Fetal Thymus thymus
6 chr5:14716000-14737000 Weak transcription Rectal Smooth Muscle rectum
7 chr5:14717200-14730600 Weak transcription Ovary ovary
8 chr5:14718200-14733000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr5:14721200-14730000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr5:14721400-14739000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr5:14721400-14741400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr5:14721600-14737800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr5:14721600-14738200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr5:14725200-14740200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr5:14725400-14758600 Weak transcription Primary hematopoietic stem cells blood
16 chr5:14725600-14732200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr5:14725800-14730000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr5:14725800-14730200 Weak transcription Aorta Aorta
19 chr5:14725800-14745400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr5:14726800-14730200 Weak transcription Right Ventricle heart
21 chr5:14726800-14739000 Weak transcription HMEC breast
22 chr5:14726800-14739600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr5:14726800-14739600 Weak transcription NHEK skin
24 chr5:14727000-14745600 Weak transcription Placenta Placenta
25 chr5:14727200-14730600 Weak transcription Dnd41 blood
26 chr5:14727200-14736400 Weak transcription Primary T cells from cord blood blood
27 chr5:14727200-14742600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr5:14727200-14748000 Weak transcription Placenta Amnion Placenta Amnion
29 chr5:14727200-14757000 Weak transcription NHLF lung
30 chr5:14727800-14730200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr5:14727800-14730400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
32 chr5:14727800-14739600 Weak transcription NH-A brain
33 chr5:14728000-14733000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr5:14728000-14736800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr5:14728000-14740600 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr5:14728000-14743600 Weak transcription HSMMtube muscle
37 chr5:14728000-14745000 Weak transcription Primary B cells from peripheral blood blood
38 chr5:14728200-14730000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr5:14728200-14732000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr5:14728200-14732000 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr5:14728200-14739400 Weak transcription Muscle Satellite Cultured Cells --
42 chr5:14728200-14739600 Weak transcription NHDF-Ad bronchial
43 chr5:14728400-14731000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr5:14728400-14732600 Weak transcription Hela-S3 cervix
45 chr5:14728400-14739400 Strong transcription Osteobl bone
46 chr5:14728600-14730800 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr5:14728600-14732000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr5:14728600-14736400 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr5:14728800-14730800 Weak transcription Fetal Heart heart
50 chr5:14728800-14732800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015