The 2.0 version of rSNPBase

Variant report

Variant rs11975450
Chromosome Location chr7:50510400-50510401
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50486200-50513200 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr7:50495200-50513000 Weak transcription Duodenum Mucosa Duodenum
3 chr7:50495200-50517200 Weak transcription Stomach Mucosa stomach
4 chr7:50495600-50513800 Weak transcription HepG2 liver
5 chr7:50496000-50513000 Weak transcription Gastric stomach
6 chr7:50496200-50517600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr7:50499400-50513000 Weak transcription Psoas Muscle Psoas
8 chr7:50500000-50513400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr7:50500600-50513000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr7:50501000-50517400 Weak transcription Esophagus oesophagus
11 chr7:50502200-50513600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:50502400-50517200 Weak transcription Small Intestine intestine
13 chr7:50503000-50513000 Weak transcription Spleen Spleen
14 chr7:50503600-50512800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr7:50503800-50511600 Weak transcription K562 blood
16 chr7:50503800-50512400 Weak transcription Placenta Placenta
17 chr7:50504200-50511400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr7:50504200-50513200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr7:50504200-50513800 Weak transcription NH-A brain
20 chr7:50504400-50511000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr7:50504400-50513000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr7:50504400-50513000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr7:50504600-50511800 Strong transcription Fetal Thymus thymus
24 chr7:50504600-50513000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr7:50504600-50513000 Weak transcription Brain Substantia Nigra brain
26 chr7:50504600-50513000 Strong transcription Dnd41 blood
27 chr7:50504600-50513200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr7:50504600-50513400 Weak transcription Brain Angular Gyrus brain
29 chr7:50504600-50513800 Weak transcription Rectal Smooth Muscle rectum
30 chr7:50504600-50515000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr7:50504600-50517200 Weak transcription Pancreas Pancrea
32 chr7:50504800-50513000 Weak transcription Hela-S3 cervix
33 chr7:50504800-50513000 Weak transcription NHLF lung
34 chr7:50504800-50513000 Weak transcription Osteobl bone
35 chr7:50504800-50513200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr7:50504800-50513200 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr7:50504800-50513400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr7:50504800-50516000 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr7:50504800-50516800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr7:50504800-50517400 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr7:50505000-50511000 Weak transcription NHDF-Ad bronchial
42 chr7:50505000-50513000 Weak transcription Left Ventricle heart
43 chr7:50505000-50513400 Weak transcription Muscle Satellite Cultured Cells --
44 chr7:50505000-50513800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr7:50505400-50513400 Weak transcription Colon Smooth Muscle Colon
46 chr7:50505400-50517200 Weak transcription H9 Cell Line embryonic stem cell
47 chr7:50505400-50517200 Weak transcription Placenta Amnion Placenta Amnion
48 chr7:50505600-50512000 Strong transcription HUVEC blood vessel
49 chr7:50505600-50515000 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr7:50505600-50515200 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015