Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10098417	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10104877	1.00[CEU][hapmap]
rs11988360	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11996694	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11997658	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12114319	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16932411	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2357566	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2357657	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2357663	0.96[CEU][hapmap];1.00[JPT][hapmap]
rs2357666	0.96[CEU][hapmap];0.86[JPT][hapmap]
rs2884235	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4262311	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4355757	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4380924	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6981354	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6983945	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6992002	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6996761	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6997496	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7006789	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7010679	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7017618	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7465415	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7821284	0.96[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66922800-66933000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr8:66923200-66931200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr8:66923200-66934400	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr8:66923200-66934600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr8:66928000-66931200	Weak transcription	Primary T cells from cord blood	blood
6	chr8:66928000-66931200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr8:66928200-66931200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr8:66928400-66931000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
9	chr8:66928400-66931200	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr8:66928400-66934600	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr8:66929000-66935200	Weak transcription	Primary B cells from peripheral blood	blood
12	chr8:66929200-66933600	Weak transcription	Primary monocytes fromperipheralblood	blood
13	chr8:66929400-66931200	Weak transcription	GM12878-XiMat	blood
14	chr8:66930600-66931600	Enhancers	Fetal Thymus	thymus
15	chr8:66930600-66931600	Enhancers	Thymus	Thymus

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