Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10092435	0.81[EUR][1000 genomes]
rs10098417	0.92[CEU][hapmap]
rs10104877	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs11988360	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs11991974	0.96[CEU][hapmap]
rs11995443	1.00[CHB][hapmap];0.93[JPT][hapmap];0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11996694	0.82[CEU][hapmap]
rs11997658	0.92[CEU][hapmap]
rs12114319	0.96[CEU][hapmap]
rs16932411	0.92[CEU][hapmap]
rs2357566	0.92[CEU][hapmap]
rs2357657	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs2357663	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2357666	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2884235	0.96[CEU][hapmap]
rs4262311	0.96[CEU][hapmap];0.82[EUR][1000 genomes]
rs4355757	0.92[CEU][hapmap]
rs4380924	0.92[CEU][hapmap]
rs55876952	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6981354	0.82[CEU][hapmap]
rs6982577	0.82[EUR][1000 genomes]
rs6983945	0.96[CEU][hapmap]
rs6992002	0.96[CEU][hapmap]
rs6994799	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6996761	0.92[CEU][hapmap]
rs7002734	0.82[EUR][1000 genomes]
rs7006789	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs7010679	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs7011042	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7017618	0.96[CEU][hapmap]
rs7465415	0.92[CEU][hapmap]
rs7832776	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66949800-66958000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:66950400-66958000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr8:66954600-66960200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:66954800-66957000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:66954800-66958000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:66956000-66960400	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr8:66956400-66960000	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr8:66956400-66960400	Weak transcription	Psoas Muscle	Psoas

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