Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12004475	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1327512	1.00[ASN][1000 genomes]
rs1373252	1.00[CHB][hapmap]
rs1410025	1.00[ASN][1000 genomes]
rs1576066	1.00[ASN][1000 genomes]
rs16931054	1.00[ASN][1000 genomes]
rs16931057	1.00[ASN][1000 genomes]
rs16931061	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16931089	1.00[ASN][1000 genomes]
rs1854162	1.00[ASN][1000 genomes]
rs55646577	1.00[ASN][1000 genomes]
rs55772107	1.00[ASN][1000 genomes]
rs58444683	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61441143	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61695591	1.00[ASN][1000 genomes]
rs67685423	1.00[ASN][1000 genomes]
rs67946774	1.00[ASN][1000 genomes]
rs73415097	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7468217	1.00[ASN][1000 genomes]
rs7871066	1.00[ASN][1000 genomes]
rs953747	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022001	chr9:13717736-13983738	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1033764	chr9:13764918-14226168	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv1032113	chr9:13861066-13923136	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv1032447	chr9:13861066-13923673	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13863400-13884200	Weak transcription	Left Ventricle	heart

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