The 2.0 version of rSNPBase

Variant report

Variant rs12038713
Chromosome Location chr1:172021415-172021416
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172006400-172025600 Weak transcription Adipose Nuclei Adipose
2 chr1:172009200-172022800 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:172010000-172022200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:172010400-172022000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:172010600-172022400 Weak transcription HMEC breast
6 chr1:172010600-172051400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:172010800-172022400 Weak transcription NHEK skin
8 chr1:172010800-172037600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:172011400-172037800 Weak transcription Ovary ovary
10 chr1:172012600-172022600 Weak transcription Fetal Lung lung
11 chr1:172013000-172022400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:172014000-172023800 Weak transcription Primary T cells from cord blood blood
13 chr1:172014200-172024200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:172014600-172024400 Weak transcription Brain Germinal Matrix brain
15 chr1:172015000-172024200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:172015000-172033200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:172015000-172042600 Weak transcription Fetal Brain Female brain
18 chr1:172015200-172022800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:172015200-172026000 Weak transcription Aorta Aorta
20 chr1:172015200-172032400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:172016600-172037800 Weak transcription Brain Substantia Nigra brain
22 chr1:172017000-172022400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:172019000-172024200 Weak transcription Brain Anterior Caudate brain
24 chr1:172020200-172023400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:172020200-172024400 Weak transcription Brain Cingulate Gyrus brain
26 chr1:172020200-172038800 Weak transcription Brain Angular Gyrus brain
27 chr1:172020200-172040600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:172021400-172022200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:172021400-172024200 Weak transcription Brain Hippocampus Middle brain
30 chr1:172021400-172026600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015