Variant report

Variant rs12055164
Chromosome Location chr5:37372017-37372018
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37369200-37372200 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr5:37369200-37372400 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr5:37369400-37372200 Active TSS iPS-15b Cell Line embryonic stem cell
4 chr5:37369600-37372200 Active TSS Psoas Muscle Psoas
5 chr5:37369800-37372200 Active TSS H1 Cell Line embryonic stem cell
6 chr5:37369800-37372200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:37369800-37372200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr5:37369800-37372200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
9 chr5:37369800-37372200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
10 chr5:37369800-37372200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
11 chr5:37369800-37372200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr5:37369800-37372200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr5:37369800-37372200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
14 chr5:37369800-37372200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
15 chr5:37370000-37372200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:37370000-37372200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:37370000-37372200 Active TSS Aorta Aorta
18 chr5:37370000-37372400 Active TSS HUES6 Cell Line embryonic stem cell
19 chr5:37370000-37372400 Active TSS HUES64 Cell Line embryonic stem cell
20 chr5:37370000-37372400 Active TSS GM12878-XiMat blood
21 chr5:37370200-37372200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr5:37370200-37372200 Active TSS Fetal Brain Male brain
23 chr5:37370200-37372200 Active TSS Pancreatic Islets Pancreatic Islet
24 chr5:37370200-37372200 Active TSS Rectal Smooth Muscle rectum
25 chr5:37370600-37372200 Active TSS Brain Anterior Caudate brain
26 chr5:37370800-37372200 Active TSS Brain Angular Gyrus brain
27 chr5:37370800-37372200 Active TSS Duodenum Mucosa Duodenum
28 chr5:37370800-37372200 Active TSS Rectal Mucosa Donor 29 rectum
29 chr5:37370800-37372200 Active TSS Rectal Mucosa Donor 31 rectum
30 chr5:37371000-37372200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr5:37371000-37372200 Active TSS Stomach Smooth Muscle stomach
32 chr5:37371400-37372200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
33 chr5:37371400-37372200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr5:37371600-37372200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr5:37371600-37372200 Flanking Active TSS HMEC breast
36 chr5:37371800-37372200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
37 chr5:37371800-37372200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr5:37371800-37372200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr5:37371800-37372200 Flanking Active TSS Brain Germinal Matrix brain
40 chr5:37371800-37372200 Flanking Active TSS Brain Hippocampus Middle brain
41 chr5:37371800-37372200 Flanking Active TSS Fetal Intestine Large intestine
42 chr5:37371800-37372200 Flanking Active TSS NHEK skin
43 chr5:37371800-37372600 Weak transcription Hela-S3 cervix
44 chr5:37372000-37372200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr5:37372000-37372200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr5:37372000-37372200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
47 chr5:37372000-37372200 Enhancers Primary neutrophils fromperipheralblood blood
48 chr5:37372000-37372200 Enhancers Primary B cells from cord blood blood
49 chr5:37372000-37372200 Enhancers Primary B cells from peripheral blood blood
50 chr5:37372000-37372200 Enhancers Primary T cells from cord blood blood

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