Variant report

Variant	rs12069997
Chromosome Location	chr1:165495550-165495551
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10800104	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10918202	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10918203	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10918204	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10918206	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11810548	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11810716	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12059369	0.87[ASN][1000 genomes]
rs12069141	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12071681	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12084147	0.87[ASN][1000 genomes]
rs12084656	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12084745	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12087952	0.91[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12092351	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12092613	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12095088	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs169556	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs176230	0.91[ASN][1000 genomes]
rs1913840	0.91[ASN][1000 genomes]
rs2162143	0.83[ASN][1000 genomes]
rs2478258	0.85[ASN][1000 genomes]
rs285461	0.91[ASN][1000 genomes]
rs285463	0.91[ASN][1000 genomes]
rs285469	0.91[ASN][1000 genomes]
rs285470	0.91[ASN][1000 genomes]
rs34505661	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41302541	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs422264	0.85[ASN][1000 genomes]
rs56767425	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57348245	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59800771	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7522076	0.84[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165493200-165496600	Enhancers	HepG2	liver
2	chr1:165494800-165496400	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr1:165495000-165495600	Enhancers	H9 Cell Line	embryonic stem cell
4	chr1:165495000-165496000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:165495000-165496400	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr1:165495200-165496600	Weak transcription	Fetal Muscle Leg	muscle
7	chr1:165495400-165496000	Enhancers	Fetal Heart	heart

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