Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10918204	0.84[ASN][1000 genomes]
rs11810716	0.84[ASN][1000 genomes]
rs12059369	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12069141	0.84[ASN][1000 genomes]
rs12069997	0.84[ASN][1000 genomes]
rs12071681	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12084147	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12084656	0.89[GIH][hapmap]
rs12087952	0.88[CHD][hapmap];0.83[GIH][hapmap]
rs12092613	0.84[ASN][1000 genomes]
rs12095088	0.84[ASN][1000 genomes]
rs12738175	0.98[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs169556	0.90[ASN][1000 genomes]
rs176230	1.00[JPT][hapmap]
rs1913840	1.00[JPT][hapmap]
rs2433136	0.94[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2478258	0.82[ASN][1000 genomes]
rs2766082	0.94[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs285461	0.88[CHD][hapmap];1.00[JPT][hapmap]
rs34505661	0.84[ASN][1000 genomes]
rs41267562	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs41302541	0.84[ASN][1000 genomes]
rs422264	1.00[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs56767425	0.84[ASN][1000 genomes]
rs57348245	0.84[ASN][1000 genomes]
rs59800771	0.84[ASN][1000 genomes]
rs6676649	0.92[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7512593	0.92[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs7512674	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165547400-165566800	Weak transcription	Psoas Muscle	Psoas
2	chr1:165554400-165554800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:165554400-165555600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:165554400-165556400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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