Variant report

Variant	rs12071681
Chromosome Location	chr1:165497204-165497205
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10800104	0.91[ASN][1000 genomes]
rs10918202	0.91[ASN][1000 genomes]
rs10918203	0.91[ASN][1000 genomes]
rs10918204	1.00[ASN][1000 genomes]
rs10918206	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11810548	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11810716	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12059369	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12069141	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12069997	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12084147	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12084656	0.91[ASN][1000 genomes]
rs12084745	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs12087952	1.00[CEU][hapmap];0.81[ASN][1000 genomes]
rs12092351	0.91[ASN][1000 genomes]
rs12092613	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12095088	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs169556	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs176230	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1913840	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs2162143	0.83[ASN][1000 genomes]
rs2478258	0.85[ASN][1000 genomes]
rs285461	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs285463	0.91[ASN][1000 genomes]
rs285469	0.91[ASN][1000 genomes]
rs285470	0.91[ASN][1000 genomes]
rs34505661	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41302541	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs422264	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs56767425	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57348245	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59800771	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7522076	1.00[JPT][hapmap];0.84[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165496000-165497400	Flanking Active TSS	Fetal Heart	heart
2	chr1:165497000-165501400	Weak transcription	Left Ventricle	heart
3	chr1:165497200-165499400	Weak transcription	Fetal Muscle Leg	muscle
4	chr1:165497200-165499400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr1:165497200-165501400	Weak transcription	Right Ventricle	heart

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