The 2.0 version of rSNPBase

Variant report

Variant rs12076668
Chromosome Location chr1:95445455-95445456
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
3 chr1:95436600-95451200 Weak transcription Small Intestine intestine
4 chr1:95436800-95448600 Weak transcription Brain Angular Gyrus brain
5 chr1:95437600-95455600 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:95437800-95455000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:95437800-95458400 Weak transcription Liver Liver
8 chr1:95438200-95445800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:95439400-95445800 Weak transcription Fetal Stomach stomach
10 chr1:95439400-95446000 Weak transcription Primary T cells from cord blood blood
11 chr1:95439600-95448600 Weak transcription Right Ventricle heart
12 chr1:95440200-95450600 Weak transcription Colon Smooth Muscle Colon
13 chr1:95440400-95447800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:95440800-95447200 Weak transcription Adipose Nuclei Adipose
15 chr1:95440800-95448800 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr1:95441000-95445600 Weak transcription NHLF lung
17 chr1:95441000-95445800 Weak transcription HMEC breast
18 chr1:95441000-95446000 Weak transcription NH-A brain
19 chr1:95441200-95445600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:95441200-95445800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:95441200-95445800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:95441200-95445800 Weak transcription NHDF-Ad bronchial
23 chr1:95441200-95446000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:95441400-95445600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:95442800-95445800 Weak transcription Duodenum Mucosa Duodenum
26 chr1:95444000-95446800 Enhancers Primary B cells from peripheral blood blood
27 chr1:95444200-95445800 Enhancers Primary B cells from cord blood blood
28 chr1:95444200-95446400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:95445000-95447600 Enhancers Primary hematopoietic stem cells blood
30 chr1:95445000-95448600 Enhancers Muscle Satellite Cultured Cells --
31 chr1:95445200-95446400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr1:95445200-95446800 Enhancers Fetal Heart heart
33 chr1:95445200-95447000 Enhancers HSMMtube muscle
34 chr1:95445200-95447000 Enhancers Osteobl bone
35 chr1:95445200-95447800 Enhancers Placenta Amnion Placenta Amnion
36 chr1:95445200-95449200 Enhancers Fetal Muscle Leg muscle
37 chr1:95445200-95450000 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr1:95445400-95445600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:95445400-95446000 Bivalent Enhancer Fetal Intestine Small intestine
40 chr1:95445400-95446400 Enhancers Rectal Mucosa Donor 29 rectum
41 chr1:95445400-95446800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:95445400-95446800 Enhancers Duodenum Smooth Muscle Duodenum
43 chr1:95445400-95446800 Enhancers Left Ventricle heart
44 chr1:95445400-95447000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:95445400-95447000 Enhancers Right Atrium heart
46 chr1:95445400-95447600 Enhancers Rectal Mucosa Donor 31 rectum
47 chr1:95445400-95448600 Enhancers HSMM muscle
48 chr1:95445400-95449000 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr1:95445400-95449400 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015