The 2.0 version of rSNPBase

Variant report

Variant rs7520836
Chromosome Location chr1:95438188-95438189
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95422000-95450800 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:95428800-95439200 Weak transcription Aorta Aorta
3 chr1:95429000-95439800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
5 chr1:95429200-95440200 Weak transcription Fetal Intestine Small intestine
6 chr1:95436200-95438200 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr1:95436200-95438200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:95436200-95438200 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr1:95436200-95438200 Enhancers HMEC breast
10 chr1:95436200-95438200 Enhancers NHLF lung
11 chr1:95436200-95438200 Enhancers Osteobl bone
12 chr1:95436200-95440000 Enhancers NHDF-Ad bronchial
13 chr1:95436200-95441200 Enhancers HSMM muscle
14 chr1:95436400-95438200 Enhancers Fetal Muscle Leg muscle
15 chr1:95436600-95445200 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:95436600-95451200 Weak transcription Small Intestine intestine
17 chr1:95436800-95448600 Weak transcription Brain Angular Gyrus brain
18 chr1:95437000-95440200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:95437000-95441200 Enhancers HSMMtube muscle
20 chr1:95437200-95439800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:95437400-95442000 Weak transcription Fetal Heart heart
22 chr1:95437600-95438200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:95437600-95438800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:95437600-95438800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:95437600-95438800 Weak transcription Adipose Nuclei Adipose
26 chr1:95437600-95439200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:95437600-95440000 Weak transcription Fetal Kidney kidney
28 chr1:95437600-95440200 Enhancers Muscle Satellite Cultured Cells --
29 chr1:95437600-95441000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:95437600-95455600 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr1:95437800-95438200 Enhancers NHEK skin
32 chr1:95437800-95439000 Weak transcription Ovary ovary
33 chr1:95437800-95445400 Weak transcription Right Atrium heart
34 chr1:95437800-95455000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:95437800-95458400 Weak transcription Liver Liver
36 chr1:95438000-95438200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:95438000-95439200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:95438000-95439200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:95438000-95439200 Weak transcription Fetal Muscle Trunk muscle
40 chr1:95438000-95439200 Weak transcription Right Ventricle heart
41 chr1:95438000-95439200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:95438000-95439800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:95438000-95439800 Weak transcription NH-A brain
44 chr1:95438000-95440200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:95438000-95440400 Weak transcription Placenta Placenta
46 chr1:95438000-95440600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:95438000-95445400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:95438000-95445400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015